Neuronvisio¶

What is it¶

NeuronVisio is a Graphical User Interface for NEURON simulator enviroment. NeuronVisio connect with NEURON using the new python NEURON interface.

Features¶

• 3D visualization of the model with the possibility to change it runtime
• Creation of vectors to record any variables present in the section
• Pylab integration to plot directly the result of the simulation
• Exploration of the timecourse of any variable among time using a color coded scale
• the GUI runs in its own thread so it’s possible to use the console and change the model runtime

(needs to be launched from ipython)

Quick overview¶

Quick overview of the 3D capabilites. More Screenshots.

Help and development¶

Site Map¶

• Neuronvisio
• Install
  • Requirements
  • Ubuntu and friends
  • Mayavi SVN
  • Mac OS X
  • Windows
  • Package Install
  • Legacy releases
  • Source Code
• Getting Started
  • How does it work
  • How to integrate NeuronVisio with your code
  • NeuronVisio features
  • Plotting the simulation results
  • Investigate the section parameters
• Screenshots
  • Gtk GUI control
  • 3-Dimensions with a simple model
  • 3-Dimensions with a complex model
  • Animation window and pylab graph
• Reference
  • neuronvisio.manager – Manage the map between vectors and sections
  • neuronvisio.visio – 3D Visual operations
  • neuronvisio.controls – Gtk UI module
• Changes in Neuronvisio
  • 0.4.1 - 28 Jan 2010
  • 0.4.0 - 19 Jan 2010
  • 0.3.5 - 20 Nov 2009
  • 0.3.4 - 15 Sep 2009
  • 0.3.3 - 3 Sep 2009
  • 0.3.22 - 31 Jul 2009
  • 0.3.21 - 20 Jul 2009
  • 0.3.2 - 20 Jul 2009
  • 0.3.1 - 18 Jul 2009
  • 0.3.0 - 14 Jul 2009
  • 0.2.0 - 6 Jul 2009
  • 0.1.0 - 30 Jun 2009

Indices and tables¶

• Index
• Module Index
• Search Page